spapros.pl.correlation_matrix

spapros.pl.correlation_matrix(set_ids, cor_matrices, show=True, save=False, size_factor=5, fontsize=28, n_cols=3, colorbar=True)

Plot heatmap of gene correlation matrix.

Parameters:

• set_ids (List[str]) – List of probe set ids.

• cor_matrices (Dict[str, DataFrame]) – Ordered correlation matrix of each probe set given in set_ids.

• show (bool) – Show the figure.

• save (Union[Literal[False], str]) – Save plot to path.

• size_factor (float) – Factor for scaling the figure size.

• fontsize (int) – Matplotlib fontsize.

• colorbar (bool) – Whether to draw a colorbar.

• n_cols (int) – Number of subplot columns.

Return type:

None